I-Vdi141I

Type

Wild-Type


Target Sequence

-11  -10  -9   -8   -7   -6   -5   -4   -3   -2   -1   1    2    3    4    5    6    7    8    9    10   11  
C T G A C T C T C T T A A G G T A G C C A A

FASTA Sequence



MVHEEDFKEGYILGFIEAEGSFSVSIKFQRDVFGGVRLDPVFSITQKNREVLEAIKEHLGIGRIMEKAGQPNTYV
YVVDNFNELVKLINFLNKYADFMIVKKRQFLMFREIANGLVNGEHLHINGLKRLVKLAYELTKESEKGYRKYDLN
HVLSIIDKWDLGRNVSTSL

Crystal Structure

PDB File
PyMOL File

Position Weight Matrix

I-Vdi141I


posACGT
-11 0.30 1.00 0.40 0.10
-10 0.00 0.00 0.10 1.00
-9 0.00 0.00 1.00 0.00
-8 1.00 0.10 1.00 0.00
-7 0.00 1.00 0.00 0.00
-6 0.10 1.00 1.00 1.00
-5 0.70 1.00 0.20 0.10
-4 0.50 1.00 0.10 1.00
-3 0.00 1.00 0.00 0.00
-2 0.10 0.00 0.00 1.00
-1 0.10 0.10 0.00 1.00
1 1.00 0.00 0.90 0.10
2 1.00 0.00 0.00 0.10
3 0.00 0.00 1.00 0.00
4 0.30 0.05 1.00 0.10
5 0.10 0.20 0.30 1.00
6 1.00 0.30 1.00 0.20
7 0.00 0.00 1.00 0.00
8 0.00 1.00 0.00 0.70
9 0.00 1.00 0.00 0.00
10 1.00 0.10 0.00 0.00
11 1.00 0.30 0.80 0.40

PWM Additional Information

Author: Barry Stoddard

Notes:



Additional Information

Author: Barry Stoddard

Notes:


Date Added: 2012-01-01