I-LtrI / I-PanMI

Type

Chimera


Target Sequence

-11  -10  -9   -8   -7   -6   -5   -4   -3   -2   -1   1    2    3    4    5    6    7    8    9    10   11  
A A T G C T C C T A T T C C T T A T C A A G

FASTA Sequence



FPVQARNDNITPWWITGFADAESSFMLTVSKDSKRNTGWSVRPRFRIGLHNKDVSILKSIREYLGAGIITSDKDA
RIRFESLKELEVVINHFDKYPLITQKRADYLLFKKAFYLIKNKEHLTEEGLNQILTLKASLNLGLSEELKEAFPN
TIPAEKLLISGTILNPAWLSGFVSGEGCFSVVVFKSKTSKLGEAVKLSFILTQSNRDEYLIKSLIEYLGCGNTSL
DPRGTIDFKVTNFSSIKDIIVPFFIKYPLIGNKNLDFTDFCEVVRLMENKSHLTKEGLDQIKKIRNRMNTNRK

(-) Endonuclease Amino Acid Contact Modules

ModuleAmino Acid Contact Modules (?)
-11 → -9:Asp 39, Lys 41, Arg 42, Asn 43, Thr 44, Gly 45, Ser 47
-8 → -6:Met 33, Thr 35, Ser 37, Arg 49, Arg 51, Ile 75, Thr 77, Arg 85, Glu 87
-6 → -4:Ser 31, Met 33, Arg 53, Gly 55, Thr 77, Arg 83, Arg 85
-5 → -3:Ser 31, Arg 53, Gly 55, Ile 80*, Asp 81*, Arg 83, Arg 85

(+) Endonuclease Amino Acid Contact Modules

ModuleAmino Acid Contact Modules (?)
+3 → +5:Cys 179, Ser 181, Ile 201, Thr 203, Asp 227, Arg 229*, Tyr 231, Asp 233
+4 → +6:Ser 181, Val 183, Ser 199, Ile 201, Asn 223, Ser 225, Asp 227, Lys 235
+6 → +8:Val 183, Phe 185, Ala 195, Lys 197, Ser 199, Asn 223, Thr 237
+9 → +11:Phe 185, Ser 187, Thr 189*, Ser 190, Lys 191, Leu 192, Gly 193, Ala 195

Key
Experiment
Crystal Structure
Sequence Alignment
* Uncertain